Pull Synapse Table into Dataframe The purpose. of this function is to pull info from a synapse table into a dataframe.

table_pull(syn_id, feature_name, features, column_names, synap_import)

Arguments

syn_id	the synapse ID of the ie 'syn25556478'
feature_name	the column of the feature to treat as rows ie.'GeneName'
features	the values of the feature to pull ie. names(igraph::V(net))
column_names	the column values that. should be pulled for each feature-row ie c('ENSG', 'GeneName', 'OmicsScore', ' GeneticsScore', 'Logsdon')
synap_import	is the reticulated imported synapse from log_into_synapse()$synapse eg. syn

Value

a dataframe object

Examples

if (FALSE) {
syn <- log_into_synapse()

omics_scores <- table_pull( 
 syn_id ='syn25575156',
 feature_name = 'GeneName' ,
 features = names(igraph::V(net)),
 column_names = c('ENSG', 'GeneName', 'OmicsScore', 'GeneticsScore', 'Logsdon'),
 synap_import = syn$synapse
)
}