The basic Pathway Commons network. This is all SIF Pathway commons interactions loaded into a network. The CHEMI interactions are present. The igraph network object consisting of 30,910 genes and 1,902,605 interactions. basic_network$graph is a list of networks. Each network is every interaction in Pathway Commons consisting of a specific type of interaction.
basic_network
A list object
Vertex names
Network edges
Type of interaction
How many Pathway Commons databases record an interaction between to and from vertex
The Unique Code of the entire interaction
The Pathway(s) in Pathway commons this interaction is documented in as a list object
How many interaction types are there between to and from vertacies
The to:from name desigantion of the edge
how many times is to vertex connected to from vertex across all pathway commons data bases and interaction types